- Title Pages
- 1. The Role of Modeling in Systems Biology
- 2 Complexity and Robustness of Cellular Systems
- 3 On Modules and Modularity
- 4. Bayesian Inference of Biological Systems: The Logic of Biology
- 5. Stoichiometric and Constraint-based Modeling
- 6. Modeling Molecular Interaction Networks with Nonlinear Ordinary Differential Equations
- 7 Qualitative Approaches to the Analysis of Genetic Regulatory Networks
- 8 Stochastic Modeling of Intracellular Kinetics
- 9 Kinetics in Spatially Extended Systems
- 10 Biological Data Acquisition for System Level Modeling—An Exercise in the Art of Compromise
- 11 Methods to Identify Cellular Architecture and Dynamics from Experimental Data
- 12 Using Control Theory to Study Biology*
- 13 Synthetic Gene Regulatory Systems
- 14 Multilevel Modeling in Systems Biology
- 15 Computational Constraints on Modeling in Systems Biology
- 16 Numerical Simulation for Biochemical Kinetics
- 17. Software Infrastructure for Effective Communication and Reuse of Computational Models
- A Software Tools for Biological Modeling
- System Modeling in Cellular Biology
- The MIT Press
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