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Combinatorics of Genome Rearrangements$
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Guillaume Fertin, Anthony Labarre, Irena Rusu, Eric Tannier, and Stéphane Vialette

Print publication date: 2009

Print ISBN-13: 9780262062824

Published to MIT Press Scholarship Online: August 2013

DOI: 10.7551/mitpress/9780262062824.001.0001

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PRINTED FROM MIT PRESS SCHOLARSHIP ONLINE (www.mitpress.universitypressscholarship.com). (c) Copyright The MIT Press, 2021. All Rights Reserved. An individual user may print out a PDF of a single chapter of a monograph in MITSO for personal use.date: 28 July 2021

Rearrangement Phylogenies

Rearrangement Phylogenies

Chapter:
(p.207) 14 Rearrangement Phylogenies
Source:
Combinatorics of Genome Rearrangements
Author(s):

Guillaume Fertin

Anthony Labarre

Irena Rusu

Eric Tannier

Steéphane Vialette

Publisher:
The MIT Press
DOI:10.7551/mitpress/9780262062824.003.0014

This chapter presents models to handle signed permutations of the same set of elements. It covers the large parsimony problem; the large parsimony problem with gene orders; and heuristics for the breakpoint/reversal phylogeny problem.

Keywords:   signed permutations, large parsimony problem, gene orders, breakpoint/reversal phylogeny problem

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